Basic information   
Locus name AT1G02390
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryLipid/Carbohydrate metabolism
Effect for Senescenceunclear
Gene Descriptionphospholipid/glycerol acyltransferase family protein contains Pfam profile PF01553: Acyltransferase
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
biological process
molecular function
Protein-Protein Interaction
STRING
SequenceAT1G02390.1 | Genomic | mRNA | CDS | Protein
Microarray   
Expression Level (Log2 ratio)
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_164184
AccessionTaxon
NP_192104Arabidopsis thaliana
NP_563651 ( AT1G02390 ) Arabidopsis thaliana
NP_001067034Oryza sativa Japonica Group
NP_001068455Oryza sativa Japonica Group
29908.m005967Ricinus communis
30076.m004618Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR313473.3E-2136528No hitNA
PANTHERPTHR31347:SF03.3E-2136528No hitNA
SUPERFAMILYSSF695939.3E-33243529No hitNA
PfamPF015536.3E-8320420IPR002123Phospholipid/glycerol acyltransferase
SMARTSM005636.4E-13333435IPR002123Phospholipid/glycerol acyltransferase
Subcellular Localization   
Localizationplasma membrane,endoplasmic reticulum
EvidenceSUBAcon
Pubmed ID23180787

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