Basic information   
Locus name AT1G01300
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryProtein degradation/modification
Effect for Senescenceunclear
Gene Descriptionaspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane. Gene expression is increased during leaf senescence.
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston V
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
biological process
molecular function
Protein-Protein Interaction
STRING
SequenceAT1G01300.1 | Genomic | mRNA | CDS | Protein
Ortholog Group      
Ortholog Groups: OG5_177450
AccessionTaxon
NP_171637 ( AT1G01300 ) Arabidopsis thaliana
NP_001043485Oryza sativa Japonica Group
NP_001056485Oryza sativa Japonica Group
29742.m001409Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR136832.5E-14968484IPR001461Peptidase A1
PANTHERPTHR13683:SF982.5E-14968484No hitNA
SUPERFAMILYSSF506302.1E-102135484IPR021109Aspartic peptidase
Gene3DG3DSA:2.40.70.101.1E-41139308IPR021109Aspartic peptidase
PfamPF000262.2E-21141481IPR001461Peptidase A1
PRINTSPR007925.4E-6148168IPR001461Peptidase A1
Gene3DG3DSA:2.40.70.108.6E-50314485IPR021109Aspartic peptidase
PRINTSPR007925.4E-6362373IPR001461Peptidase A1
PRINTSPR007925.4E-6456471IPR001461Peptidase A1
Subcellular Localization   
Localizationextracellular
EvidenceSUBAcon
Pubmed ID23180787

© Center for Bioinformatics(CBI), Peking University