Basic information   
Locus name AT1G01830
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene Descriptionarmadillo/beta-catenin repeat family protein; FUNCTIONS IN: binding. Gene expression is increased during leaf senescence.
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston V
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
molecular function
Protein-Protein Interaction
STRING
SequenceAT1G01830.1 | Genomic | mRNA | CDS | Protein
AT1G01830.2 | Genomic | mRNA | CDS | Protein
AT1G01830.3 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT1G01830.2 
miRNA: ath-miR773b-3p
mfe: -29.7 kcal/mol 
p-value: 0.003359 

position: 87 
target 5' G                    C  3' 
           GAGAC AAGGUUGGAGUCGA     
           CUCUG UUUCGACCUUAGUU     
miRNA  3'       U              U  5' 

target: AT1G01830.3 
miRNA: ath-miR773b-3p
mfe: -29.7 kcal/mol 
p-value: 0.004026 

position: 386 
target 5' G                    C  3' 
           GAGAC AAGGUUGGAGUCGA     
           CUCUG UUUCGACCUUAGUU     
miRNA  3'       U              U  5' 
Ortholog Group      
Ortholog Groups: OG5_147131
AccessionTaxon
NP_001031543Arabidopsis thaliana
NP_001077443Arabidopsis thaliana
NP_001077444Arabidopsis thaliana
NP_182096Arabidopsis thaliana
NP_563637 ( AT1G01830 ) Arabidopsis thaliana
NP_001048764Oryza sativa Japonica Group
e_gw1.21.52.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_1500090Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_300146Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1050004Physcomitrella patens subsp. patens
30174.m008962Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR233159.9E-2071554No hitNA
PANTHERPTHR23315:SF339.9E-2071554No hitNA
Gene3DG3DSA:1.25.10.101.3E-34169397IPR011989Armadillo-like helical
SUPERFAMILYSSF483713.0E-45169548IPR016024Armadillo-type fold
SMARTSM00185160.0198239IPR000225Armadillo
PfamPF136461.8E-6213316No hitNA
SMARTSM0018528.0240280IPR000225Armadillo
ProSiteProfilesPS5017611.3251293IPR000225Armadillo
SMARTSM001852.0281321IPR000225Armadillo
SMARTSM00185260.0322363IPR000225Armadillo
SMARTSM001851.3365403IPR000225Armadillo
Gene3DG3DSA:1.25.10.101.8E-19398550IPR011989Armadillo-like helical
PfamPF005148.1E-6444482IPR000225Armadillo
SMARTSM001850.6444484IPR000225Armadillo

© Center for Bioinformatics(CBI), Peking University