Basic information   
Locus name AT1G02470
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene DescriptionUnknown protein. Gene expression is increased during leaf senescence.
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston V
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Protein-Protein Interaction
STRING
SequenceAT1G02470.1 | Genomic | mRNA | CDS | Protein
AT1G02470.2 | Genomic | mRNA | CDS | Protein
Microarray   
Expression Level (Log2 ratio)
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_211605
AccessionTaxon
NP_001077451 ( AT1G02470 ) Arabidopsis thaliana
NP_563655Arabidopsis thaliana
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.530.203.8E-979217IPR023393START-like domain
SUPERFAMILYSSF559612.0E-2279218No hitNA
PfamPF033641.2E-1686213IPR005031Streptomyces cyclase/dehydrase
Subcellular Localization   
Localizationplastid
EvidenceSUBAcon
Pubmed ID23180787

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