Basic information   
Locus name AT1G02670
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryTranscription regulation
Effect for Senescenceunclear
Gene DescriptionDNA repair protein, putative; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair. Gene expression is increased during leaf senescence.
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston V
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
molecular function
Protein-Protein Interaction
STRING
SequenceAT1G02670.1 | Genomic | mRNA | CDS | Protein
Ortholog Group      
Ortholog Groups: OG5_127144
AccessionTaxon
NP_171767 ( AT1G02670 ) Arabidopsis thaliana
NP_196132Arabidopsis thaliana
NP_197667Arabidopsis thaliana
NP_199166Arabidopsis thaliana
CMR259CCyanidioschyzon merolae strain 10D
152316Chlamydomonas reinhardtii
177618Chlamydomonas reinhardtii
ACO60649Micromonas sp. RCC299
ACO64322Micromonas sp. RCC299
NP_001047001Oryza sativa Japonica Group
NP_001052168Oryza sativa Japonica Group
NP_001060436Oryza sativa Japonica Group
estExt_Genewise1.C_730104Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_410017Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_14000215Physcomitrella patens subsp. patens
28703.m000017Ricinus communis
29603.m000529Ricinus communis
29991.m000632Ricinus communis
e_gw1.6.75.1Thalassiosira pseudonana CCMP1335
XP_002945661Volvox carteri f. nagariensis
XP_002950941Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR107990.034677No hitNA
PANTHERPTHR10799:SF620.034677No hitNA
SUPERFAMILYSSF525403.2E-44114330IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3001.0E-27129319No hitNA
SMARTSM004877.9E-26130330IPR014001Helicase, superfamily 1/2, ATP-binding domain
PfamPF001763.9E-50137440IPR000330SNF2-related
ProSiteProfilesPS5119218.5147324IPR014001Helicase, superfamily 1/2, ATP-binding domain
SUPERFAMILYSSF525401.8E-55268308IPR027417P-loop containing nucleoside triphosphate hydrolase
SUPERFAMILYSSF525401.8E-55498677IPR027417P-loop containing nucleoside triphosphate hydrolase
Gene3DG3DSA:3.40.50.3004.1E-15504651No hitNA
ProSiteProfilesPS5119414.0504669IPR001650Helicase, C-terminal
SMARTSM004902.7E-15539622IPR001650Helicase, C-terminal
PfamPF002714.9E-10545622IPR001650Helicase, C-terminal

© Center for Bioinformatics(CBI), Peking University