Basic information   
Locus name LOC_Os01g61460
OrganismRice (Oryza sativa)
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene DescriptionLeaf senescence related protein, putative, expressed
EvidenceMolecular evidence:Homolog analysis [Ref 1]
References
1: Ouyang S, Zhu W, Hamilton J, Lin H, Campbell M, Childs K, Thibaud-Nissen F, Malek RL, Lee Y, Zheng L, Orvis J, Haas B, Wortman J, Buell CR
The TIGR Rice Genome Annotation Resource: improvements and new features.
Nucleic Acids Res. 2007 Jan;35(Database issue):D883-7

Protein-Protein Interaction
STRING
SequenceLOC_Os01g61460.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: LOC_Os01g61460.1 
miRNA: osa-miR5539
mfe: -33.6 kcal/mol 
p-value: 0.000939 

position: 1410 
target 5' C       A       C     C  3' 
           GGCGCGC CGUCCGU UUCUU     
           UCGUGCG GUAGGCA AAGAA     
miRNA  3' A       C       A        5' 
Ortholog Group      
Ortholog Groups: OG5_184565
AccessionTaxon
NP_001044698 ( LOC_Os01g61460 ) Oryza sativa Japonica Group
NP_001055807Oryza sativa Japonica Group
NP_001065529Oryza sativa Japonica Group
NP_001065927Oryza sativa Japonica Group
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR322851.2E-174168520No hitNA
PANTHERPTHR32285:SF01.2E-174168520No hitNA
PfamPF144161.3E-22169223IPR025846PMR5 N-terminal domain
PfamPF138392.0E-69224515IPR026057PC-Esterase

© Center for Bioinformatics(CBI), Peking University